Building user-defined chemistry... -- The C compiler identification is GNU 7.5.0 -- The CXX compiler identification is GNU 7.5.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- MKLROOT environment variable not found. Will use default MKL paths... -- Unix (not Apple) OS detected... -- MODEL_PARAMETERS path: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params -- MODEL_DISCRETISATION path: /home/ivan_korotkin/workspace/DandeLiion/src/FV -- Configuring done -- Generating done -- Build files have been written to: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build Scanning dependencies of target daecpp_static [ 3%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/jacobian.cpp.o [ 6%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/debug_output.cpp.o [ 10%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/mass_matrix.cpp.o [ 13%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/matrix_add.cpp.o [ 16%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/matrix_checker.cpp.o [ 20%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/matrix_converter.cpp.o [ 23%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/solver.cpp.o [ 26%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/solver_options.cpp.o [ 30%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/time_integrator.cpp.o [ 33%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/time_stepper.cpp.o [ 36%] Linking CXX static library libdaecpp_static.a [ 36%] Built target daecpp_static Scanning dependencies of target fullcell-cpp [ 40%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/initial_conditions.cpp.o [ 43%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/fullcell.cpp.o [ 46%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/opt_parser.cpp.o [ 50%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/output.cpp.o [ 53%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/output_paraview.cpp.o [ 56%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/output_tecplot.cpp.o [ 60%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/plotting.cpp.o [ 63%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/progress_bar.cpp.o [ 66%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/stop_condition.cpp.o [ 70%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Cathode_Ueq.cpp.o [ 73%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Anode_Ueq.cpp.o [ 76%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Electrolyte_Conductivity.cpp.o [ 80%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Electrolyte_Diffusivity.cpp.o /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Electrolyte_Diffusivity.cpp: In function ‘double D_of_c_and_T(double, double, double, double)’: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/params/Electrolyte_Diffusivity.cpp:5:12: warning: unused variable ‘x’ [-Wunused-variable] double x = 1e-3 * c; // mol/m^3 to mol/l ^ [ 83%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/FV/fullcell_Jacobian.cpp.o [ 86%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/FV/fullcell_Mass.cpp.o [ 90%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/FV/fullcell_RHS.cpp.o [ 93%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/FV/fullcell_grid.cpp.o [ 96%] Building CXX object CMakeFiles/fullcell-cpp.dir/parameters/DriveCycle/DriveCycle_reader.cpp.o [100%] Linking CXX executable fullcell-cpp [100%] Built target fullcell-cpp [ 36%] Built target daecpp_static [100%] Built target fullcell-cpp Install the project... -- Install configuration: "Release" -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/fullcell-cpp -- Set runtime path of "/home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/fullcell-cpp" to "" -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/anode.txt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/cathode.txt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/cell.txt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/output.txt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/separator.txt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/multiplot.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/multiplot_nokey.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/parameters.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/potential_solid.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/temperature.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/voltage.plt -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/run_example.sh -- Installing: /home/ivan_korotkin/workspace/dandeliion-server/dandeliion-django/builds/777e1430-2e54-41e6-bbd5-bde121520ad3/build/bin/rebuild.sh Executing...  Full Cell 1D+1D Newman model ============================ Trying to open cell.txt...FOUND Trying to open anode.txt...FOUND Trying to open cathode.txt...FOUND Trying to open separator.txt...FOUND Trying to open output.txt...FOUND  Battery cells: 1 Grid (Liquid x Solid): 29x29 + 19 + 29x29 Total number of DAEs: 1898  (Dis)charge current = -0.15625 A  Output times: 0, 1000, 2000, 3000, 4000, 5000, 6000, 7000, 8000, 9000, t_max = 10000 sec.  Float precision: 64 bit Integer precision: 32 bit Numerical algorithm: BDF-2 Integration time t = [0, 1000]: Number of equations: 1898 Step 1 :: t = 0.1 :: ###> Step 2 :: t = 0.3 :: ##> Step 3 :: t = 0.7 :: ##> Step 4 :: t = 1.5 :: ###> Step 5 :: t = 3.1 :: ###> Step 6 :: t = 6.3 :: ###> Step 7 :: t = 12.7 :: ####> Step 8 :: t = 25.5 :: ####> Step 9 :: t = 51.1 :: #####> Step 10 :: t = 102.3 :: ############ Step 11 :: t = 153.5 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 11 :: t = 127.9 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 11 :: t = 115.1 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 11 :: t = 108.7 :: ####> Step 12 :: t = 121.5 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 12 :: t = 115.1 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 12 :: t = 111.9 :: ############ Step 13 :: t = 115.1 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 13 :: t = 113.5 :: ############ Step 14 :: t = 115.1 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 14 :: t = 114.3 :: ##### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 14 :: t = 113.9 :: ######### Step 15 :: t = 114.3 :: ############# Step 16 :: t = 114.7 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 16 :: t = 114.5 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 16 :: t = 114.4 :: ########### Step 17 :: t = 114.5 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 17 :: t = 114.45 :: ######### Step 18 :: t = 114.5 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 18 :: t = 114.475 :: ######## Step 19 :: t = 114.5 :: ###############< Step 20 :: t = 114.513 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 20 :: t = 114.506 :: ############ Step 21 :: t = 114.513 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 21 :: t = 114.509 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 21 :: t = 114.508 :: ####### Step 22 :: t = 114.509 :: ######### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 22 :: t = 114.509 :: ###### Step 23 :: t = 114.509 :: ############ Step 24 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 24 :: t = 114.51 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 24 :: t = 114.51 :: ######## Step 25 :: t = 114.51 :: #####################< Step 26 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 26 :: t = 114.51 :: #################< Step 27 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 27 :: t = 114.51 :: ########### Step 28 :: t = 114.51 :: ########################< Step 29 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 29 :: t = 114.51 :: ############## Step 30 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 30 :: t = 114.51 :: ############# Step 31 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 31 :: t = 114.51 :: ############ Step 32 :: t = 114.51 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 32 :: t = 114.51 :: ########## Step 33 :: t = 114.51 :: ###############< Step 34 :: t = 114.51 :: ##################< Step 35 :: t = 114.51 :: ####################< Step 36 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 36 :: t = 114.51 :: ########### Step 37 :: t = 114.51 :: #################< Step 38 :: t = 114.51 :: #####################< Step 39 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 39 :: t = 114.51 :: ########### Step 40 :: t = 114.51 :: #################< Step 41 :: t = 114.51 :: ########################< Step 42 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 42 :: t = 114.51 :: ############ Step 43 :: t = 114.51 :: ###################< Step 44 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 44 :: t = 114.51 :: ########### Step 45 :: t = 114.51 :: ##################< Step 46 :: t = 114.51 :: ##### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 46 :: t = 114.51 :: ########## Step 47 :: t = 114.51 :: ############# Step 48 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 48 :: t = 114.51 :: ############ Step 49 :: t = 114.51 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 49 :: t = 114.51 :: ########### Step 50 :: t = 114.51 :: #################< Step 51 :: t = 114.51 :: ####################< Step 52 :: t = 114.51 :: ### Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 52 :: t = 114.51 :: ########### Step 53 :: t = 114.51 :: ###############< Step 54 :: t = 114.51 :: #################< Step 55 :: t = 114.51 :: #################< Step 56 :: t = 114.51 :: ##################< Step 57 :: t = 114.51 :: ######################### <- redo Step 57 :: t = 114.51 :: ########## Step 58 :: t = 114.51 :: ############ Step 59 :: t = 114.51 :: # Newton iterations diverged. Review the solver options. Trying to recover... # <- redo Step 59 :: t = 114.51 :: ############ Step 60 :: t = 114.51 :: ######################## ERROR: The time step was reduced to 5.68434e-15 but the scheme failed to converge ERROR: The time step was reduced to 5.68434e-15 but the scheme failed to converge ...FAILED