Building user-defined chemistry...
-- The C compiler identification is GNU 8.5.0
-- The CXX compiler identification is GNU 8.5.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- MKLROOT environment variable not found. Will use default MKL paths...
-- Unix (not Apple) OS detected...
-- MODEL_PARAMETERS path: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/params
-- MODEL_DISCRETISATION path: /home/ik3g18/workspace/DandeLiion/src/FE
-- Configuring done (0.6s)
-- Generating done (0.0s)
-- Build files have been written to: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build
[  3%] Building CXX object CMakeFiles/daecpp_static.dir/dae-cpp/src/debug_output.cpp.o
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[ 36%] Linking CXX static library libdaecpp_static.a
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[ 43%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/initial_conditions.cpp.o
[ 46%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/FE/fullcell_Jacobian.cpp.o
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[ 53%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/fullcell.cpp.o
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[ 63%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/opt_parser.cpp.o
[ 63%] Building CXX object CMakeFiles/fullcell-cpp.dir/parameters/DriveCycle/DriveCycle_reader.cpp.o
[ 66%] Building CXX object CMakeFiles/fullcell-cpp.dir/src/output.cpp.o
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[ 86%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/params/Anode_Ueq.cpp.o
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[ 93%] Building CXX object CMakeFiles/fullcell-cpp.dir/home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/params/Electrolyte_Diffusivity.cpp.o
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Install the project...
-- Install configuration: "Release"
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/fullcell-cpp
-- Set runtime path of "/home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/fullcell-cpp" to ""
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/multiplot.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/multiplot_nokey.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/parameters.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/potential_solid.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/temperature.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/voltage.plt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/anode.txt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/cathode.txt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/cell.txt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/output.txt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/separator.txt
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/rebuild.sh
-- Installing: /home/ik3g18/workspace/legacy/dandeliion-server/dandeliion-django/builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/run_example.sh

Executing...

Full Cell 1D+1D Newman model
============================

Trying to open cell.txt...FOUND
Trying to open anode.txt...FOUND
Trying to open cathode.txt...FOUND
Trying to open separator.txt...FOUND
Trying to open output.txt...FOUND

Battery cells:         1
Grid (Liquid x Solid): 30x3 + 20 + 30x30
Total number of DAEs:  1210

(Dis)charge current = 0.0007383 A

Output times: 0, 0, 3.3006, 53.3006, 103.301, 153.301, 203.301, 253.301, 303.301, 353.301, 403.301, 453.301, 503.301, 553.301, 603.301, 653.301, 703.301, 753.301, 803.301, 853.301, 903.301, 953.301, 1003.3, 1053.3, 1103.3, 1153.3, 1203.3, 1253.3, 1303.3, 1353.3, 1403.3, 1453.3, 1503.3, 1553.3, 1603.3, 1653.3, 1703.3, 1753.3, 1803.3, 1853.3, 1903.3, 1953.3, 2003.3, 2053.3, 2103.3, 2153.3, 2203.3, 2253.3, 2303.3, 2353.3, 2403.3, 2453.3, 2503.3, 2553.3, 2603.3, 2653.3, 2703.3, 2753.3, 2803.3, 2853.3, 2903.3, 2953.3, 3003.3, 3053.3, 3103.3, 3153.3, 3203.3, 3253.3, 3303.3, 3353.3, 3403.3, 3453.3, 3503.3, 3553.3, 3603.3, 3653.3, 3703.3, 3753.3, 3803.3, 3853.3, 3903.3, 3953.3, 4003.3, 4053.3, 4103.3, 4153.3, 4203.3, 4253.3, 4303.3, 4353.3, 4403.3, 4453.3, 4503.3, 4553.3, 4603.3, 4653.3, 4703.3, 4753.3, 4803.3, 4853.3, 4903.3, 4953.3, 5003.3, 5053.3, 5103.3, 5153.3, 5203.3, 5253.3, 5303.3, 5353.3, 5403.3, 5453.3, 5503.3, 5553.3, 5603.3, 5653.3, 5703.3, 5753.3, 5803.3, 5853.3, 5903.3, 5953.3, 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Float precision:     64 bit
Integer precision:   32 bit
Numerical algorithm: BDF-2
Integration time t = [0, 0]:
Integration time t = [0, 3.3006]:
Number of equations: 1210
free(): invalid size
./builds/9214fe91-e148-4e83-91b0-7d22f73498e8/build/bin/runner.sh: line 20: 1220500 Aborted                 (core dumped) OMP_NUM_THREADS=$CORES MKL_NUM_THREADS=$CORES ./fullcell-cpp